: List each accession number (e.g., PRJNAXXXXX or ERRXXXXX) on a new line . Save : Save the file as ena_list.txt .
: Large sequence files (Fastq, BAM) must be compressed using gzip before the text manifest references them. 🚀 Recommended Tools Webin-CLI
: Ensure you use the exact headers provided by the ENA Checklist . 🛠️ Step 2: Preparing for "Download" (Data Retrieval)
: Use this file with the command-line tool: getENA.py -accfile ena_list.txt 📤 Step 3: Preparing for Submission (Upload) To prepare a text-based metadata file for upload:
: These are typically .tsv (Tab-Separated Values) files but are often saved with a .txt extension for compatibility.
If your goal is to download a list of accessions in a .txt format to use with tools like enaBrowserTools or Webin-CLI :
The standard command-line tool for validating and submitting files.
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