Identifies the software version (jModelTest v2.1.x) and input data.
Typically, these files contain a list of models, parameter estimates, and likelihood scores. 2. How to Generate/Use the File
Lists the likelihood ratios for various substitution models. 20 j.txt
Ensure you are using the correct command-line syntax as outlined in the jModelTest Manual.
The program will generate a .txt file containing the summary of the best-fit model, which can be used to interpret the results. Identifies the software version (jModelTest v2
You can specify -AIC and -BIC for model selection strategies. 3. Detailed File Structure & Analysis
Run the jModelTest JAR file from your command line: java -jar jModelTest.jar -d alignment.phy -f -i -g 4 -t ml -AIC -BIC . How to Generate/Use the File Lists the likelihood
jModelTest files (.txt) store the results of model selection strategies, including Akaike Information Criterion (AIC) and Bayesian Information Criterion (BIC).